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Sample GSM2038743 Query DataSets for GSM2038743
Status Public on Jan 20, 2016
Title SJBALL022430
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL7722
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
17519 7.412977586
17541 7.358058281
42485 7.305056366
17415 9.077755011
42545 7.378259812
17283 7.327861077
17306 7.395369637
42882 7.330657493
27537 8.889642689
17655 7.454080324
17623 7.309827787
42897 7.327861077
17358 8.643760252
42773 7.291576269
42943 10.38738996
42466 7.606233183
17657 7.330657493
42522 10.45078409
42613 7.870772296
42974 10.25760402

Total number of rows: 1276

Table truncated, full table size 22 Kbytes.




Supplementary file Size Download File type/resource
GSM2038743_SWP000_SWP283_miR10_6409Cv60.gpr.gz 471.6 Kb (ftp)(http) GPR
Processed data included within Sample table

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