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Sample GSM2038744 Query DataSets for GSM2038744
Status Public on Jan 20, 2016
Title SJHYPER069
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL7722
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
17519 7.508010564
17541 7.353714932
42485 7.309005894
17415 8.760280125
42545 7.383612798
17283 7.208881021
17306 7.445787283
42882 7.291283571
27537 9.036475844
17655 7.408796718
17623 7.445787283
42897 7.38608691
17358 8.750233556
42773 7.225675705
42943 10.37403143
42466 7.540568013
17657 7.305056366
42522 9.877768339
42613 7.728261128
42974 10.25760402

Total number of rows: 1276

Table truncated, full table size 22 Kbytes.




Supplementary file Size Download File type/resource
GSM2038744_SWP000_SWP201_miR10_6135Cv60.gpr.gz 472.5 Kb (ftp)(http) GPR
Processed data included within Sample table

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