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Sample GSM2038745 Query DataSets for GSM2038745
Status Public on Jan 20, 2016
Title SJMLL003
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL7722
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
17519 7.415559424
17541 7.494137779
42485 7.319668443
17415 8.771202634
42545 7.38608691
17283 7.237449539
17306 7.494137779
42882 7.34352217
27537 9.392456416
17655 7.332164802
17623 7.396840203
42897 7.38608691
17358 9.019394312
42773 7.225675705
42943 11.06739444
42466 7.932775018
17657 7.295889678
42522 11.10865598
42613 7.653076541
42974 10.9884684

Total number of rows: 1276

Table truncated, full table size 22 Kbytes.




Supplementary file Size Download File type/resource
GSM2038745_SWP000_SWP205_miR10_6124Cv60.gpr.gz 471.8 Kb (ftp)(http) GPR
Processed data included within Sample table

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