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Sample GSM2038746 Query DataSets for GSM2038746
Status Public on Jan 20, 2016
Title SJETV014
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL7722
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
17519 7.35509234
17541 7.417679968
42485 7.331040326
17415 8.400428637
42545 7.404734212
17283 7.318986341
17306 7.432025108
42882 7.300002407
27537 9.382236069
17655 7.369141808
17623 7.475073745
42897 7.313342143
17358 8.342916219
42773 7.252350384
42943 10.34399522
42466 7.722555619
17657 7.304876506
42522 10.28519766
42613 7.473362717
42974 9.960773904

Total number of rows: 1276

Table truncated, full table size 22 Kbytes.




Supplementary file Size Download File type/resource
GSM2038746_SWP000_SWP206_miR10_6125Cv60.gpr.gz 487.2 Kb (ftp)(http) GPR
Processed data included within Sample table

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