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Sample GSM2038748 Query DataSets for GSM2038748
Status Public on Jan 20, 2016
Title SJBALL197
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL7722
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
17519 7.511612937
17541 7.438159859
42485 7.3329694
17415 9.069872936
42545 7.625808239
17283 7.248310622
17306 7.570709133
42882 7.231954804
27537 9.153022928
17655 7.414053953
17623 7.42500291
42897 7.427912756
17358 9.200912629
42773 7.253668837
42943 10.88634946
42466 7.772163905
17657 7.319377346
42522 11.31196223
42613 7.728261128
42974 10.65901962

Total number of rows: 1276

Table truncated, full table size 22 Kbytes.




Supplementary file Size Download File type/resource
GSM2038748_SWP000_SWP209_miR10_6129Cv60.gpr.gz 460.8 Kb (ftp)(http) GPR
Processed data included within Sample table

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