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GEO accession:
Sample GSM21003
Query DataSets for GSM21003
Status
Public on May 02, 2004
Title
cDNA apetala1 set2
Sample type
RNA
Channel 1
Source name
wild type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
apetala1 inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and apetala1 inflorescences.
The data were preprocessed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 04, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1069
Series (2)
GSE1265
cDNA array expression profile apetala1
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
WT_set3
Normalized signal intensity for the wild type sample
ap1_set3
Normalized signal intensity for the mutant sample
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Ratio: mutant/wild type
Data table
ID_REF
WT_set3
ap1_set3
VALUE
PRE_VALUE
GP000A1
0.039085646
0.038619421
-0.0173123
0.988071713
GP000A2
0.022037714
0.019389958
-0.1846653
0.879853379
GP000A3
0.05948685
0.067272752
0.1774513
1.130884421
GP000A4
0.032745164
0.045049202
0.4602203
1.375751325
GP000B1
0.026017133
0.03340666
0.3606743
1.284025417
GP000B3
0.024551066
0.031841016
0.3751013
1.296930087
GP000C1
0.029334235
0.025425568
-0.2063053
0.866754069
GP000C2
0.050086689
0.043023879
-0.2192903
0.858988281
GP000C3
0.023377062
0.024282484
0.0548223
1.038731233
GP000C4
0.312234741
0.313799824
0.0072133
1.005012521
GP000D1
0.024723526
0.04358684
0.8180083
1.7629702
GP000D2
0.022214723
0.027488158
0.3072943
1.237384651
GP000D3
0.138345652
0.14793238
0.0966613
1.069295478
GP000D4
0.16546427
0.213738922
0.3693303
1.291752728
GP000E1
0.034979259
0.039597076
0.1788943
1.132015871
GP000E2
0.029867032
0.019880817
-0.5871773
0.66564419
GP000E3
0.019409357
0.016473537
-0.2366023
0.848742022
GP000E4
0.072948614
0.074945058
0.0389533
1.027367803
GP000F1
0.344383299
0.463893629
0.4297793
1.347027078
GP000F2
0.726003822
0.409384691
-0.8265203
0.563887791
Total number of rows:
9413
Table truncated, full table size
499 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21003.GPR.gz
822.0 Kb
(ftp)
(http)
GPR
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