GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM21013
Query DataSets for GSM21013
Status
Public on May 02, 2004
Title
cDNA agamous set1
Sample type
RNA
Channel 1
Source name
wild-type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
agamous inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and agamous inflorescences.
The data were preprocessed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 04, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1069
Series (2)
GSE1269
cDNA array expression profile agamous
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
WT_set1
Normalized signal intensity for the wild type sample
ag_set1
Normalized signal intensity for the mutant sample
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Ratio: mutant/wild type
Data table
ID_REF
WT_set1
ag_set1
VALUE
PRE_VALUE
GP000A1
0.113494602
0.169144821
0.5756353
1.490333619
GP000A2
0.0462821
0.051870762
0.1644673
1.120752125
GP000A3
0.288228993
0.069878308
-2.0442993
0.242440248
GP000A4
0.023873171
0.037478044
0.6506553
1.569881282
GP000B2
0.058601206
0.048074663
-0.2856543
0.820369853
GP000B3
0.026943856
0.056359752
1.0647093
2.091747833
GP000B4
0.021622951
0.026943856
0.3173933
1.246076731
GP000C1
0.046051267
0.05458479
0.2452583
1.185304851
GP000C2
0.080459607
0.031745636
-1.3417063
0.39455371
GP000C4
0.973848044
0.460565591
-1.0802903
0.472933733
GP000D1
0.021215993
0.01912039
-0.1500403
0.901225297
GP000D2
0.030838234
0.030167201
-0.0317393
0.978240235
GP000D3
0.163654137
0.269280956
0.7184623
1.645427123
GP000D4
0.300893168
0.294345804
-0.0317393
0.978240235
GP000E1
0.034665858
0.036152832
0.0605933
1.042894479
GP000E2
0.044690247
0.039755782
-0.1687953
0.889585193
GP000E3
0.016244514
0.020547829
0.3390333
1.264908769
GP000E4
0.119313595
0.027214646
-2.1323033
0.228093419
GP000F1
0.497878105
0.596545358
0.2608393
1.19817552
GP000F2
0.500824269
2.118270598
2.0805113
4.229568591
Total number of rows:
9368
Table truncated, full table size
498 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21013.GPR.gz
810.1 Kb
(ftp)
(http)
GPR
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
