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Sample GSM211187 Query DataSets for GSM211187
Status Public on Dec 31, 2007
Title Day6A_Cy3_XY
Sample type genomic
 
Source name Blood
Organism Homo sapiens
Characteristics Gender: male; Blood of healthy persons
Extracted molecule genomic DNA
Extraction protocol DNAzol (Invitrogen) according to manufacturer's protocol
Label Cy3
Label protocol Sample_label_protocol_ch1 = DNA labeling protocol according to Enzo Life Sciences
 
Hybridization protocol Hybridization protocol available via www.agilent.com
Scan protocol Slides were scanned using the Agilent microarray scanner, protocol according to Agilent.
Description protocols according to manufacturer (Enzo Life Sciences)
Data processing Median Signal intensity minus median Background intensity; excluding negative values
 
Submission date Jul 18, 2007
Last update date Jul 31, 2007
Contact name Daoud Sie
E-mail(s) d.sie@vumc.nl
Phone +31 20 4442428
Organization name Vrije Universiteit Medical Center
Department Pathology
Lab Microarray Core Facility
Street address De Boelelaan 1117
City Amsterdam
ZIP/Postal code 1081 HV
Country Netherlands
 
Platform ID GPL5477
Series (1)
GSE8628 Across array comparative genomic hybridization

Data table header descriptions
ID_REF
gMedianSignal median signal intensity channel 1
gBGMedianSignal background median intensity channel 1
VALUE median signal intensity channel 1 minus background median intensity channel 1, excluding negative values

Data table
ID_REF gMedianSignal gBGMedianSignal VALUE
1 3260 42
2 56.5 42
3 56 43
4 55 42
5 55 43
6 56 42
7 56 42
8 55 42
9 58 42
10 56 42
11 58 42
12 416 43 373
13 916 43 873
14 2378 42 2336
15 482 43 439
16 861 42 819
17 768.5 42 726.5
18 419.5 42 377.5
19 345 43 302
20 431.5 42 389.5

Total number of rows: 45220

Table truncated, full table size 811 Kbytes.




Supplementary data files not provided
Raw data included within Sample table
Processed data included within Sample table
Processed data are available on Series record

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