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Sample GSM21212 Query DataSets for GSM21212
Status Public on Jul 19, 2004
Title Severe 867
Sample type RNA
 
Source name hippocampal CA1 tissue
Organism Homo sapiens
Characteristics ref #: 867
group: Severe
nft: 22.6
braak: 5
age: 94
mmse: 2
Sex: F
pmi: 2.72
Extracted molecule total RNA
 
Description Severe AD (MMSE<14); correlation of the expression of each gene was tested with MiniMental Status Examination (MMSE) and neurofibrillary tangle (NFT) scores
Keywords = bioinformatics
Keywords = gene expression
Keywords = memory
Keywords = synaptic plasticity
Keywords = myelin
Keywords = inflamation
Keywords = aging
Keywords = behavior
Keywords = Alzheimer's
Keywords = microarray
 
Submission date Apr 08, 2004
Last update date Jan 19, 2017
Contact name Eric M Blalock
E-mail(s) eric.blalock@uky.edu
Phone 859-323-8033
Organization name University of Kentucky
Department Molecular and Biomedical Pharmacology
Lab Blalock
Street address 800 Rose St.
City Lexington
State/province KY
ZIP/Postal code 40475
Country USA
 
Platform ID GPL96
Series (1)
GSE1297 Incipient Alzheimer's Disease: Microarray Correlation Analyses
Relations
Affiliated with GSM697335

Data table header descriptions
ID_REF Affymetrix gene ID
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 724.2 P 0.325
AFFX-BioB-M_at 1198.6 P 0.082
AFFX-BioB-3_at 716.9 P 0.391
AFFX-BioC-5_at 2267.1 P 0.105
AFFX-BioC-3_at 2214.9 P 0.476
AFFX-BioDn-5_at 1999.9 P 0.274
AFFX-BioDn-3_at 13803.1 P 0.039
AFFX-CreX-5_at 23394.5 P 1
AFFX-CreX-3_at 29953.1 P 1
AFFX-DapX-5_at 51.8 A 0.792
AFFX-DapX-M_at 80.8 A 0.911
AFFX-DapX-3_at 9.6 A 0.753
AFFX-LysX-5_at 56.7 A 0.156
AFFX-LysX-M_at 73.6 A 0.884
AFFX-LysX-3_at 3.1 A 0.035
AFFX-PheX-5_at 4.6 A 0.793
AFFX-PheX-M_at 45.6 A 0.2
AFFX-PheX-3_at 18.4 A 0.208
AFFX-ThrX-5_at 9.6 A 0.18
AFFX-ThrX-M_at 9.6 A 0.445

Total number of rows: 22283

Table truncated, full table size 531 Kbytes.




Supplementary file Size Download File type/resource
GSM21212.cel.gz 3.4 Mb (ftp)(http) CEL
GSM21212.exp.gz 471 b (ftp)(http) EXP
GSM21212.rpt.gz 966 b (ftp)(http) RPT
GSM21212.txt.gz 200.6 Kb (ftp)(http) TXT

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