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Sample GSM21217 Query DataSets for GSM21217
Status Public on Jul 19, 2004
Title Control 1003
Sample type RNA
 
Source name hippocampal CA1 tissue
Organism Homo sapiens
Characteristics ref #: 1003
group: Control
nft: 7
braak: 2
age: 80
mmse: 26
Sex: M
pmi: 2.25
Extracted molecule total RNA
 
Description Control (MMSE>25); correlation of the expression of each gene was tested with MiniMental Status Examination (MMSE) and neurofibrillary tangle (NFT) scores
Keywords = bioinformatics
Keywords = gene expression
Keywords = memory
Keywords = synaptic plasticity
Keywords = myelin
Keywords = inflamation
Keywords = aging
Keywords = behavior
Keywords = Alzheimer's
Keywords = microarray
 
Submission date Apr 08, 2004
Last update date Jan 19, 2017
Contact name Eric M Blalock
E-mail(s) eric.blalock@uky.edu
Phone 859-323-8033
Organization name University of Kentucky
Department Molecular and Biomedical Pharmacology
Lab Blalock
Street address 800 Rose St.
City Lexington
State/province KY
ZIP/Postal code 40475
Country USA
 
Platform ID GPL96
Series (1)
GSE1297 Incipient Alzheimer's Disease: Microarray Correlation Analyses
Relations
Affiliated with GSM697309

Data table header descriptions
ID_REF Affymetrix gene ID
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 983 P 0.325
AFFX-BioB-M_at 1505.8 P 0.082
AFFX-BioB-3_at 523.8 P 0.391
AFFX-BioC-5_at 2813.8 P 0.105
AFFX-BioC-3_at 2554.5 P 0.476
AFFX-BioDn-5_at 2527.6 P 0.274
AFFX-BioDn-3_at 14748.9 P 0.039
AFFX-CreX-5_at 28868.3 P 1
AFFX-CreX-3_at 36765.9 P 1
AFFX-DapX-5_at 25 A 0.792
AFFX-DapX-M_at 53.7 A 0.911
AFFX-DapX-3_at 6.9 A 0.753
AFFX-LysX-5_at 37.9 A 0.156
AFFX-LysX-M_at 91.4 A 0.884
AFFX-LysX-3_at 23.4 A 0.035
AFFX-PheX-5_at 46.5 A 0.793
AFFX-PheX-M_at 2.8 A 0.2
AFFX-PheX-3_at 23.1 A 0.208
AFFX-ThrX-5_at 16.2 A 0.18
AFFX-ThrX-M_at 9.2 A 0.445

Total number of rows: 22283

Table truncated, full table size 529 Kbytes.




Supplementary file Size Download File type/resource
GSM21217.cel.gz 3.2 Mb (ftp)(http) CEL
GSM21217.exp.gz 470 b (ftp)(http) EXP
GSM21217.rpt.gz 969 b (ftp)(http) RPT
GSM21217.txt.gz 200.4 Kb (ftp)(http) TXT

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