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Sample GSM212639 Query DataSets for GSM212639
Status Public on Jul 22, 2008
Title classIIhiMECs NODaireWT rep3
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, NODaireWT
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: NOD
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, NODaireWT jos3788
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 258.908567915769
1415671_at 1267.60135586058
1415672_at 1944.41108949101
1415673_at 349.541955665162
1415674_a_at 543.886596026628
1415675_at 428.555156005127
1415676_a_at 2215.25856791577
1415677_at 546.497609134567
1415678_at 844.755830226496
1415679_at 3236.07591855578
1415680_at 291.39331508547
1415681_at 282.290946538657
1415682_at 168.008568080297
1415683_at 2665.61514279177
1415684_at 236.108567915769
1415685_at 97.8644463960752
1415686_at 1415.4417010101
1415687_a_at 5028.87080447979
1415688_at 1221.18685879677
1415689_s_at 416.969641344722

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212639.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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