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Sample GSM2127633 Query DataSets for GSM2127633
Status Public on May 12, 2016
Title PT_H122_Follicular
Sample type RNA
 
Source name Follicular_cervix
Organism Homo sapiens
Characteristics tissue: endocervix
phases of the menstrual cycle: Follicular
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from 30 mg of frozen tissue using the RNeasy Fibrous Tissue Mini Kit (Qiagen) according to manufacturer protocols. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised by Ingenuity
 
Submission date Apr 20, 2016
Last update date May 13, 2016
Contact name Julie Kim
E-mail(s) j-kim4@northwestern.edu
Phone 312-503-5377
Organization name Northwestern University
Department Obstetrics and Gynecology
Lab Lurie 4-250
Street address 303 E. Superior St
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL10558
Series (1)
GSE80455 Transcriptional Profiling of Human Endocervical Tissues Reveals Distinct Gene Expression in the Follicular and Luteal Phases of the Menstrual Cycle

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1762337 6.897828271
ILMN_2055271 6.954309545
ILMN_1736007 6.830562609
ILMN_2383229 6.94259808
ILMN_1806310 6.859447621
ILMN_1779670 6.803443508
ILMN_1653355 6.893422643
ILMN_1717783 6.771690607
ILMN_1705025 6.906046541
ILMN_1814316 6.845883026
ILMN_2359168 6.75739458
ILMN_1731507 6.850843648
ILMN_1787689 6.817939704
ILMN_3241953 7.226310849
ILMN_1745607 9.842556069
ILMN_2136495 7.105198385
ILMN_1668111 6.869538333
ILMN_2295559 6.905022376
ILMN_1735045 8.722360556
ILMN_1680754 6.976916947

Total number of rows: 47323

Table truncated, full table size 1150 Kbytes.




Supplementary file Size Download File type/resource
GSM2127633_PT_H122.idat.gz 1.6 Mb (ftp)(http) IDAT
Processed data included within Sample table

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