|
| Status |
Public on Dec 31, 2007 |
| Title |
Day5A_Cy5_mnmCRC2 |
| Sample type |
genomic |
| |
|
| Source name |
normal colon mucosa
|
| Organism |
Homo sapiens |
| Characteristics |
normal colon mucosa obtained from the same patient as CRC2 (colorectal cancer)
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA isolation protocol available via www.vumc.nl/microarrays.
Also described in Buffart et al, J Pathol. 2007 Jan;211(1):45-51
|
| Label |
Cy5
|
| Label protocol |
DNA labeling protocol according to Enzo Life Sciences
|
| |
|
| Hybridization protocol |
Hybridization protocol available via www.agilent.com
|
| Scan protocol |
Slides were scanned using the Agilent microarray scanner, protocol according to Agilent.
|
| Description |
protocols according to manufacturer (Enzo Life Scienceswww.agilent.com)
|
| Data processing |
Median Signal intensity minus median Background intensity; excluding negative values
|
| |
|
| Submission date |
Jul 30, 2007 |
| Last update date |
Jul 31, 2007 |
| Contact name |
Daoud Sie |
| E-mail(s) |
d.sie@vumc.nl
|
| Phone |
+31 20 4442428
|
| Organization name |
Vrije Universiteit Medical Center
|
| Department |
Pathology
|
| Lab |
Microarray Core Facility
|
| Street address |
De Boelelaan 1117
|
| City |
Amsterdam |
| ZIP/Postal code |
1081 HV |
| Country |
Netherlands |
| |
|
| Platform ID |
GPL5571 |
| Series (1) |
| GSE8628 |
Across array comparative genomic hybridization |
|
