|
| Status |
Public on Oct 10, 2007 |
| Title |
Mdr2-KO, 16 month old mouse 2 |
| Sample type |
RNA |
| |
|
| Source name |
Mdr2-KO mouse, 16 month old mouse, liver non-tumorous tissue sample
|
| Organism |
Mus musculus |
| Characteristics |
Genotype: Mdr2-KO homozygous mouse
Age: 16 month
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated from frozen liver tissues with Trizol reagent (Invitrogen, Carlsbad, CA) as described by the manufacturer
|
| Label |
biotin
|
| Label protocol |
The sample labeling was performed according the Affymetrix protocols: http://www.affymetrix.com/support/technical/manual/expression_manual.affx
|
| |
|
| Hybridization protocol |
The sample hybridization was performed according the Affymetrix protocols: http://www.affymetrix.com/support/technical/manual/expression_manual.affx
|
| Scan protocol |
The stained array was scanned on the Affymetrix scanner, the GCOS (Gene Operating System) generated the numerical data from the scanned intensities using the MAS 5 software (MicroArray suite 5.0; Affymetrix).
|
| Description |
According to paper: Molecular mechanisms of liver carcinogenesis in the Mdr2-knockout mice
|
| Data processing |
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings.
|
| |
|
| Submission date |
Jul 31, 2007 |
| Last update date |
Aug 14, 2011 |
| Contact name |
Mark Katzenellenbogen |
| E-mail(s) |
markbogen@gmail.com
|
| Phone |
972-3-5317119
|
| Fax |
972-3-7384097
|
| Organization name |
Bar Ilan University
|
| Department |
THE FACULTY OF LIFE SCIENCE, BIOINFORMATICS AND MICROARRAY UNIT
|
| Street address |
Ramat-Gan 52900, Israel
|
| City |
Ramat-Gan |
| ZIP/Postal code |
52900 |
| Country |
Israel |
| |
|
| Platform ID |
GPL339 |
| Series (1) |
| GSE8642 |
Molecular mechanisms of liver carcinogenesis in the Mdr2-knockout mice |
|
