|
| Status |
Public on May 06, 2008 |
| Title |
AML sample number AML10_5; diagnostic sample |
| Sample type |
genomic |
| |
|
| Source name |
AML blood/marrow cells
|
| Organism |
Homo sapiens |
| Characteristics |
no additional information
|
| Treatment protocol |
Mononuclear cells were harvested from peripheral blood or bone marrow of patients at presentation with AML and either cryopreserved in liquid nitrogen or used immediately for DNA extraction.
|
| Growth protocol |
Not applicable
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was prepared using standard proteinase K digestion and phenol/chloroform extraction
|
| Label |
biotin
|
| Label protocol |
Affymetrix 10K 2.0 mapping assay protocol
|
| |
|
| Hybridization protocol |
Affymetrix 10K 2.0 mapping assay protocol
|
| Scan protocol |
Affymetrix GeneChip scanner 3000-7G
|
| Description |
SNP genotype data from AML patient at diagnosis
|
| Data processing |
GCOS, GTYPE. Genotype calling algorithm MPAM
|
| |
|
| Submission date |
Aug 08, 2007 |
| Last update date |
Aug 14, 2011 |
| Contact name |
Manu Gupta |
| E-mail(s) |
m.gupta@rbht.nhs.uk
|
| Organization name |
Queen Mary University of London
|
| Department |
Medical Oncology
|
| Street address |
Charterhouse Sq.
|
| City |
London |
| ZIP/Postal code |
EC1M 6BQ |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL2641 |
| Series (1) |
| GSE8721 |
Novel regions of acquired uniparental disomy discovered in acute myeloid leukemia |
|
