|
| Status |
Public on Jun 01, 2019 |
| Title |
Tuberculosis 18 |
| Sample type |
genomic |
| |
|
| Source name |
Tuberculosis
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Blood
|
| Treatment protocol |
the whole-blood was stored in -80 refrigerator
|
| Growth protocol |
Extraction of genomic DNA from blood was performed using proteinase K and repeated phenol-chloroform extraction.
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNAs were extracted with DNA-extraction kits (Tiangen Biotech, Beijing, China)
|
| Label |
biotin
|
| Label protocol |
according to the manufacturer’s specifications
|
| |
|
| Hybridization protocol |
according to the manufacturer’s specifications
|
| Scan protocol |
chips were scanned using iScan instrument
|
| Description |
Genomic DNAs extracted from whole blood were genotyped using Illumina human Omni-zhonghua chips
|
| Data processing |
We used Genomestudio to call the genotypes of SNPs, and performed association study using plink.
|
| |
|
| Submission date |
Jun 15, 2016 |
| Last update date |
Jun 01, 2019 |
| Contact name |
Yong-Biao Zhang |
| E-mail(s) |
zhangyongbiao@gmail.com
|
| Phone |
+8613522471691
|
| Organization name |
Beijing Institute of Genomics
|
| Street address |
Beichen west road 1#
|
| City |
Beijing |
| State/province |
Select a State or Province |
| ZIP/Postal code |
100101 |
| Country |
China |
| |
|
| Platform ID |
GPL19864 |
| Series (1) |
| GSE83397 |
Genome-wide association study on Tuberculosis in the Chinese Population |
|
