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Sample GSM225369 Query DataSets for GSM225369
Status Public on Sep 01, 2007
Title D03 3h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1700.24 P 0.0103167
AFFX-BioB-M_at 3829.92 P 4.42873e-05
AFFX-BioB-3_at 1847.93 P 0.00179591
AFFX-BioC-5_at 6891.19 P 0.000169227
AFFX-BioC-3_at 5513.47 P 0.000169227
AFFX-BioDn-5_at 5598.94 P 7.00668e-05
AFFX-BioDn-3_at 34645.8 P 0.000126798
AFFX-CreX-5_at 48228 P 4.42873e-05
AFFX-CreX-3_at 75050.3 P 4.42873e-05
AFFX-DapX-5_at 246.908 A 0.227636
AFFX-DapX-M_at 244.181 A 0.239063
AFFX-DapX-3_at 56.4989 A 0.737173
AFFX-LysX-5_at 166.4 A 0.58862
AFFX-LysX-M_at 389.495 A 0.382599
AFFX-LysX-3_at 222.742 A 0.287743
AFFX-PheX-5_at 27.6407 A 0.897835
AFFX-PheX-M_at 38.6372 A 0.876428
AFFX-PheX-3_at 347.153 A 0.382599
AFFX-ThrX-5_at 26.874 A 0.945787
AFFX-ThrX-M_at 202.284 A 0.368438

Total number of rows: 22283

Table truncated, full table size 663 Kbytes.




Supplementary file Size Download File type/resource
GSM225369.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225369.EXP.gz 471 b (ftp)(http) EXP
Processed data included within Sample table

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