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Sample GSM225660 Query DataSets for GSM225660
Status Public on Sep 01, 2007
Title D09 12h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2018.69 P 0.00618711
AFFX-BioB-M_at 5115.84 P 6.02111e-05
AFFX-BioB-3_at 1977.45 P 0.0044838
AFFX-BioC-5_at 8003.14 P 7.00668e-05
AFFX-BioC-3_at 5824.47 P 4.42873e-05
AFFX-BioDn-5_at 7717.36 P 6.02111e-05
AFFX-BioDn-3_at 37980.9 P 6.02111e-05
AFFX-CreX-5_at 60662.7 P 4.42873e-05
AFFX-CreX-3_at 85225.6 P 4.42873e-05
AFFX-DapX-5_at 37.1374 A 0.772364
AFFX-DapX-M_at 68.795 A 0.749204
AFFX-DapX-3_at 29.5725 A 0.986189
AFFX-LysX-5_at 181.361 A 0.165861
AFFX-LysX-M_at 226.824 A 0.574038
AFFX-LysX-3_at 112.528 A 0.631562
AFFX-PheX-5_at 19.7788 A 0.957038
AFFX-PheX-M_at 20.5248 A 0.953518
AFFX-PheX-3_at 82.5938 A 0.631562
AFFX-ThrX-5_at 244.531 A 0.327079
AFFX-ThrX-M_at 45.4459 A 0.783476

Total number of rows: 22283

Table truncated, full table size 669 Kbytes.




Supplementary file Size Download File type/resource
GSM225660.CEL.gz 3.2 Mb (ftp)(http) CEL
GSM225660.EXP.gz 473 b (ftp)(http) EXP
Processed data included within Sample table

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