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Sample GSM2444 Query DataSets for GSM2444
Status Public on Sep 19, 2002
Title B7hi mTEC B6/129 wt1
Sample type RNA
 
Source name murine medullary thymic epithelial cells
Organism Mus musculus
Extracted molecule total RNA
 
Description Mice used were wild type B6/129 F2's of 3-5 weeks of age. Thymi from five of these mice of both sexes were removed and pooled. After collagenase/dispase digestion, density gradient fractionation, and fluorescent antibody staining, cells with the phenotype CD45-, G8.8+, CDR1int and B7.1hi were FACS-sorted and total RNA was made from them. RNA was twice-amplified using a T7 polymerase-based method.
 
Submission date Sep 18, 2002
Last update date May 27, 2005
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL81
Series (1)
GSE85 wild type and aire -/- murine meduallary thymic epithelial cells

Data table header descriptions
ID_REF
VALUE Microarray Suite 5.0 raw signal
ABS_CALL Microarray Suite 5.0 call -- absent, present, marginal
NORM_VALUE signal values after processing with "Norm" software

Data table
ID_REF VALUE ABS_CALL NORM_VALUE
100001_at 5.7 A 5.15
100002_at 13.7 A 12.76
100003_at 4 A 3.58
100004_at 10.3 A 9.63
100005_at 9.7 A 9.14
100006_at 7.2 P 6.61
100007_at 14.2 A 13.33
100009_r_at 24.8 P 23.69
100010_at 1.6 A 1.36
100011_at 22.7 P 21.94
100012_at 201.7 P 203.58
100013_at 48.2 P 47.52
100014_at 9.7 P 9.06
100015_at 14.7 P 14.17
100016_at 5.9 A 5.45
100017_at 5.7 A 5.28
100018_at 1.5 A 1.41
100019_at 5.5 P 5.09
100020_at 14.9 A 14.44
100021_at 3.2 A 2.9

Total number of rows: 12488

Table truncated, full table size 260 Kbytes.




Supplementary file Size Download File type/resource
GSM2444.CEL.gz 2.5 Mb (ftp)(http) CEL

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