GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM2458518 Query DataSets for GSM2458518
Status Public on Jul 18, 2017
Title LNCaP_vehicle+R1881_rep1
Sample type RNA
Source name LNCaP cells, 48h R1881 treatment
Organism Homo sapiens
Characteristics cell line: human LNCaP prostate cancer cells (immortalized cell line)
: R1881
Treatment protocol Cells were treated for 48h with R1881 (10nM), Torin 1 (100nM), or vehicles (EtOH+DMSO).
Growth protocol Cells were seeded in RPMI media with no phenol red and with charcoal-stripped serum (no steroids) . 48h later, cell were treated with 10nM R1881, Torin 1 (100nM) or vehicles (EtOH and DMSO) for 48h. Triplicate samples were sent for each conditions.
Extracted molecule total RNA
Extraction protocol RNA was purified using RNeasy mini kit from QIAGEN
Label biotin
Label protocol Labeling was performed using standard Illumina protocol at Génome Québec Innovation Centre (McGill University)
Hybridization protocol RNA was hybridized to Illumina HumanHT-12 Expression Beachip v4 and quantified at Génome Québec Innovation Centre (McGill University)
Scan protocol Scan of the microarrays was performed by the Génome Québec Innovation Centre (McGill University)
Description vehicler18811
Data processing The expression data were analyzed using FlexArray10 software.
FlexArray10 software was using for data normalization and expression comparison between groups.
Submission date Jan 13, 2017
Last update date Jul 18, 2017
Contact name Etienne Audet-Walsh
Organization name Université Laval
Department Molecular Medicine
Street address 2705 boulevard Laurier
City Québec City
State/province QC
ZIP/Postal code G1V 4G2
Country Canada
Platform ID GPL10558
Series (2)
GSE93603 Nuclear mTOR acts as a transcriptional integrator of the androgen signaling pathway in prostate cancer progression [array]
GSE93846 Nuclear mTOR acts as a transcriptional integrator of the androgen signaling pathway in prostate cancer progression

Data table header descriptions
VALUE normalized signal

Data table
ILMN_1728255 6.18314903207911
ILMN_1846128 6.1748724344229
ILMN_1651705 8.50232556314687
ILMN_1853167 6.18362006852565
ILMN_1695844 6.18155555137619
ILMN_1874323 6.18743595765628
ILMN_1666310 6.18213998289689
ILMN_1757152 6.33067771238577
ILMN_3236052 6.1720675014132
ILMN_2043569 6.22325401886872
ILMN_1811364 6.18143001481906
ILMN_1719498 6.58102384479343
ILMN_1763663 7.62411404900156
ILMN_1842320 6.18475846628262
ILMN_2278908 12.8234723223583
ILMN_1777359 6.18097996766868
ILMN_1779373 6.22697923997675
ILMN_1800412 6.23579669049793
ILMN_1812441 7.15963999845197
ILMN_1747946 6.18368604794115

Total number of rows: 47323

Table truncated, full table size 1381 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap