|
Status |
Public on Mar 12, 2008 |
Title |
129X1/SvJ 119905_SOM01GFG |
Sample type |
genomic |
|
|
Channel 1 |
Source name |
129X1/SvJ
|
Organism |
Mus musculus |
Characteristics |
sex: male tissue: kidney
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Phenol chloroform. DNA pooled from 2-6 animals.
|
Label |
Cy3 532
|
Label protocol |
see PMID 16075461
|
|
|
Channel 2 |
Source name |
C57BL/6J
|
Organism |
Mus musculus |
Characteristics |
sex: male tissue: kidney
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Phenol chloroform
|
Label |
Cy5 635
|
Label protocol |
see PMID 16075461
|
|
|
|
Hybridization protocol |
see PMID 16075461
|
Scan protocol |
see PMID 16075461
|
Description |
129X1/SvJ 119905_SOM01GFG
|
Data processing |
normalization: qspline
|
|
|
Submission date |
Feb 13, 2008 |
Last update date |
Feb 09, 2009 |
Contact name |
Patrick Cahan |
E-mail(s) |
patrick.cahan@jhmi.edu
|
Organization name |
Johns Hopkins University School of Medicine
|
Department |
ICE and Biomedical Engineering
|
Lab |
Cahan Lab
|
Street address |
733 North Broadway, MRB 653
|
City |
Baltimore |
State/province |
MD |
ZIP/Postal code |
21205 |
Country |
USA |
|
|
Platform ID |
GPL6436 |
Series (2) |
GSE10511 |
wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data |
GSE10656 |
The impact of copy number variation on local gene expression in mouse hematopoietic stem and progenitor cells |
|