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Sample GSM266959 Query DataSets for GSM266959
Status Public on Feb 09, 2009
Title M12-Test-2
Sample type RNA
 
Source name prostate cancer cell line
Organism Homo sapiens
Characteristics UV treated cells
Extracted molecule total RNA
Extraction protocol QiaGen RNeasy extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Affymetrix Standard Hybridization Protocol.
Scan protocol GeneChips were scanned using the Affymetrix Scanner.
Description prostate cancer cell line M12
Data processing The intensity data was generated with MAS5.
 
Submission date Feb 20, 2008
Last update date Aug 28, 2018
Contact name Yipeng Wang
E-mail(s) ywang@sdibr.org
Phone 8585813960
Organization name Vaccine Research Institute of San Diego
Street address
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL570
Series (1)
GSE10585 Egr1 regulates the coordinated expression of numerous EGF receptor target genes as identified by ChIP-on-chip
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS5 calculated Signal intensity

Data table
ID_REF VALUE
1007_s_at 1862.9
1053_at 3428.6
117_at 41.7
121_at 669.6
1255_g_at 4.3
1294_at 149.7
1316_at 51
1320_at 19.7
1405_i_at 70.6
1431_at 22.8
1438_at 190.9
1487_at 1703.1
1494_f_at 96.9
1598_g_at 6744.9
160020_at 355.1
1729_at 717.1
1773_at 494.1
177_at 84.5
179_at 506.6
1861_at 1067.2

Total number of rows: 54613

Table truncated, full table size 852 Kbytes.




Supplementary file Size Download File type/resource
GSM266959.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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