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Sample GSM2672145 Query DataSets for GSM2672145
Status Public on Jun 16, 2020
Title 4433719008_B: whole blood-HIV-Control
Sample type RNA
 
Source name whole blood-HIV-Control
Organism Homo sapiens
Characteristics tissue: whole blood
dataset: HIV
sample class: Control
Extracted molecule total RNA
Extraction protocol RNA was extracted with MagMAX™ RNA Isolation Kit
Label biotin
Label protocol biotin Biotinylated cRNA were prepared with the Illumina® TotalPrep-96 RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol tandard Illumina scanning protocol with BeadArray Reader 500X
Data processing The data were normalised using average normalization with Genome Studio
 
Submission date Jun 19, 2017
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6884
Series (2)
GSE100150 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring
GSE100151 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (HIV Datasets)

Data table header descriptions
ID_REF
VALUE The data were normalised using average normalization with Genome Studio
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 1.5145 0.2899
ILMN_1711886 187.1442 0
ILMN_1759828 32.3751 0.0053
ILMN_1674376 30.2317 0.0053
ILMN_1711888 2.6684 0.2213
ILMN_2111932 -3.7759 0.7826
ILMN_1686362 2.0718 0.2556
ILMN_1723874 1813.2823 0
ILMN_1662391 -3.5493 0.7497
ILMN_1662390 -5.0525 0.8682
ILMN_1686361 -6.9766 0.9657
ILMN_1686360 59.2916 0
ILMN_1723871 57.9421 0
ILMN_2086417 884.6981 0
ILMN_1686367 3818.3057 0
ILMN_1662397 -3.681 0.7747
ILMN_1721218 -3.4392 0.7365
ILMN_1711883 15.6049 0.0171
ILMN_2351611 239.7031 0
ILMN_1674373 2.7201 0.22

Total number of rows: 48803

Table truncated, full table size 1266 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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