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Sample GSM2672146 Query DataSets for GSM2672146
Status Public on Jun 16, 2020
Title 4433719008_C: whole blood-HIV-Control
Sample type RNA
 
Source name whole blood-HIV-Control
Organism Homo sapiens
Characteristics tissue: whole blood
dataset: HIV
sample class: Control
Extracted molecule total RNA
Extraction protocol RNA was extracted with MagMAX™ RNA Isolation Kit
Label biotin
Label protocol biotin Biotinylated cRNA were prepared with the Illumina® TotalPrep-96 RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol tandard Illumina scanning protocol with BeadArray Reader 500X
Data processing The data were normalised using average normalization with Genome Studio
 
Submission date Jun 19, 2017
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6884
Series (2)
GSE100150 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring
GSE100151 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (HIV Datasets)

Data table header descriptions
ID_REF
VALUE The data were normalised using average normalization with Genome Studio
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 0.2694 0.3781
ILMN_1711886 130.1351 0
ILMN_1759828 24.3408 0.0092
ILMN_1674376 7.5217 0.0804
ILMN_1711888 1.7548 0.2688
ILMN_2111932 1.9261 0.2569
ILMN_1686362 -3.5506 0.7589
ILMN_1723874 1819.3608 0
ILMN_1662391 1.7835 0.2675
ILMN_1662390 -4.4742 0.834
ILMN_1686361 -3.5687 0.7615
ILMN_1686360 53.7319 0.0013
ILMN_1723871 58.7553 0.0013
ILMN_2086417 785.628 0
ILMN_1686367 4325.729 0
ILMN_1662397 -6.5219 0.9499
ILMN_1721218 -0.6788 0.4651
ILMN_1711883 -1.4271 0.5349
ILMN_2351611 223.6149 0
ILMN_1674373 8.2325 0.0711

Total number of rows: 48803

Table truncated, full table size 1269 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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