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Sample GSM26827 Query DataSets for GSM26827
Status Public on Jul 14, 2004
Title TXPBL9
Sample type RNA
 
Source name PBL
Organism Homo sapiens
Extracted molecule total RNA
 
Description Clinical status: PBL sample from patient with well-functioning transplant with no clinical evidence of rejection
Age: 46
Sex: Male
Immunosupression: SRL/MMF/P
Histopathology: none
Donor type: LD
Scr (mg/dL): 1.2
Days post transplant: 81
Abbreviations used in sample description: Abreviations used to describe patient samples include the following: BX - Biopsy; PBL- Peripheral Blood Lymphocytes; CsA -Cyclosporine; MMF - Mycophenolate Mofetil; P - Prednisone; FK - Tacrolimus; SRL - Sirolimus; CAD -Cadaveric; LD - Live Donor; Scr - Serum Creatinine; ATN - Acute Tubular Necrosis CNI - Calcineurin Inhibitor; FSGS - Focal Segmental Glomerulosclerosis
Keywords = DNA microarrays, gene expression, kidney, rejection, transplant
 
Submission date Jul 14, 2004
Last update date Mar 16, 2009
Contact name Steven Head
E-mail(s) shead@scripps.edu
Phone 858 784-2263
Organization name The Scripps Research Institute
Street address 10550 N Torrey Pines Rd
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL8300
Series (1)
GSE1563 Kidney Transplant Rejection and Tissue Injury by Gene Profiling of Biopsies and Peripheral Blood Lymphocytes

Data table header descriptions
ID_REF
VALUE estimate of relative transcript abundance using dChip PM only model.
ABS_CALL the call in an MAS 5.0 absolute analysis that indicates if the transcript was present (P), absent (A) or marginal (M)
DETECTION P-VALUE 'detection p-value', MAS 5.0 p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 206.491 A 0.78348
AFFX-MurIL10_at 182.724 A 0.67292
AFFX-MurIL4_at 85.6524 A 0.72485
AFFX-MurFAS_at 60.4939 A 0.78348
AFFX-BioB-5_at 461.713 P 0.01381
AFFX-BioB-M_at 511.127 P 0.00058
AFFX-BioB-3_at 663.072 P 0.00097
AFFX-BioC-5_at 1161.47 P 0.00034
AFFX-BioC-3_at 1082.93 P 0.00011
AFFX-BioDn-5_at 902.649 P 0.00010
AFFX-BioDn-3_at 4202.15 P 0.00013
AFFX-CreX-5_at 5885.85 P 0.00004
AFFX-CreX-3_at 7063.17 P 0.00004
AFFX-BioB-5_st 122.865 A 0.22764
AFFX-BioB-M_st 181.791 A 0.97607
AFFX-BioB-3_st 236.033 A 0.93232
AFFX-BioC-5_st 235.441 A 0.86864
AFFX-BioC-3_st 230.574 A 0.63156
AFFX-BioDn-5_st 471.352 A 0.21652
AFFX-BioDn-3_st 495.437 A 0.12357

Total number of rows: 12625

Table truncated, full table size 334 Kbytes.




Supplementary file Size Download File type/resource
GSM26827.CEL.gz 2.9 Mb (ftp)(http) CEL
GSM26827.EXP.gz 339 b (ftp)(http) EXP

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