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Sample GSM27063 Query DataSets for GSM27063
Status Public on Nov 05, 2004
Title HNF1b_1a-
Sample type RNA
Source name INS-1 cell line #1a with non-induced HNF1b
Organism Rattus norvegicus
Extracted molecule total RNA
Description A rat insulinoma cell line (INS-1) was generated that contains a FRT site for FLP recombinase mediated site specific integration of specific genes. In addition, the line contains the tetracycline repressor allowing tetracycline (tet) induction of the introduced gene. By comparing the gene expression profiles of uninduced and tet-induced cells, target genes of introduced transcription factors can be identified. This entry corresponds to the RNA isolated from uninduced INS-1 cell line #1a containing hepatocyte nuclear factor-1b (HNF1b).
Keywords = INS-1
Keywords = beta-cell
Keywords = HNF1b
Keywords = tetracycline
Keywords = FRT
Lot batch =
Submission date Jul 20, 2004
Last update date May 27, 2005
Contact name Ludger Klein-Hitpass
Phone +49 201 723 85552
Organization name Institut fuer Zellbiologie
Department Universitaetsklinikum
Lab BioChip Lab
Street address Virchowstr. 173
City Essen
ZIP/Postal code D-45122
Country Germany
Platform ID GPL341
Series (3)
GSE1589 Targets of HNF1b, HNF4a2 and HNF6 in INS-1 cells
GSE1590 Targets of HNF1b mutants in INS-1
GSE6428 HNF1b, HNF4a2 and HNF6 targets

Data table header descriptions
VALUE ='signal', a measure of the abundance of the transcript
ABS_CALL = the call in an absolute analysis that indicates if the transcript is reliably detected (Present, P) or not detected (Absent, A)
DETECTION P-VALUE = p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 310.9 P 0.002867
AFFX-BioB-M_at 543.9 P 0.00034
AFFX-BioB-3_at 186.5 P 0.004998
AFFX-BioC-5_at 681.7 P 0.00007
AFFX-BioC-3_at 442.5 P 0.000081
AFFX-BioDn-5_at 920.8 P 0.000754
AFFX-BioDn-3_at 4549 P 0.000258
AFFX-CreX-5_at 6769.2 P 0.000044
AFFX-CreX-3_at 12394.2 P 0.000044
AFFX-DapX-5_at 145.1 P 0.000446
AFFX-DapX-M_at 339.1 P 0.006871
AFFX-DapX-3_at 440 P 0.001796
AFFX-LysX-5_at 2750.1 P 0.000044
AFFX-LysX-M_at 3843.1 P 0.000044
AFFX-LysX-3_at 6678 P 0.000044
AFFX-PheX-5_at 6171.1 P 0.000044
AFFX-PheX-M_at 6506.8 P 0.000044
AFFX-PheX-3_at 6974.4 P 0.000044
AFFX-ThrX-5_at 1018.1 P 0.000052
AFFX-ThrX-M_at 1109.7 P 0.000044

Total number of rows: 15923

Table truncated, full table size 432 Kbytes.

Supplementary data files not provided

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