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Sample GSM27147 Query DataSets for GSM27147
Status Public on Nov 05, 2004
Title HNF1b_1a+
Sample type RNA
Source name INS-1 cell line #1a with induced HNF1b
Organism Rattus norvegicus
Extracted molecule total RNA
Description A rat insulinoma cell line (INS-1) was generated that contains a FRT site for FLP recombinase mediated site specific integration of specific genes. In addition, the line contains the tetracycline repressor allowing tetracycline (tet) induction of the introduced gene. By comparing the gene expression profiles of uninduced and tet-induced cells, target genes of introduced transcription factors can be identified. This entry corresponds to the RNA isolated from tet-induced INS-1 cell line #1a containing hepatocyte nuclear factor-1b (HNF1b).
Keywords = INS-1
Keywords = beta-cell
Keywords = HNF1b
Keywords = tetracycline
Keywords = FRT
Submission date Jul 21, 2004
Last update date May 27, 2005
Contact name Ludger Klein-Hitpass
Phone +49 201 723 85552
Organization name Institut fuer Zellbiologie
Department Universitaetsklinikum
Lab BioChip Lab
Street address Virchowstr. 173
City Essen
ZIP/Postal code D-45122
Country Germany
Platform ID GPL341
Series (3)
GSE1589 Targets of HNF1b, HNF4a2 and HNF6 in INS-1 cells
GSE1590 Targets of HNF1b mutants in INS-1
GSE6428 HNF1b, HNF4a2 and HNF6 targets

Data table header descriptions
VALUE ‘signal’, a measure of the abundance of the transcript
ABS_CALL the call in an absolute analysis that indicates whether a transcript is reliably detected (Present, P) or not detected (Absent, A)
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 367.3 P 0.00141
AFFX-BioB-M_at 538.6 P 0.00034
AFFX-BioB-3_at 209.2 P 0.001593
AFFX-BioC-5_at 804.8 P 0.000095
AFFX-BioC-3_at 434.4 P 0.000044
AFFX-BioDn-5_at 904.6 P 0.000662
AFFX-BioDn-3_at 5197.1 P 0.00039
AFFX-CreX-5_at 7307.2 P 0.000044
AFFX-CreX-3_at 12169.9 P 0.000044
AFFX-DapX-5_at 114.1 P 0.000258
AFFX-DapX-M_at 236.6 P 0.005565
AFFX-DapX-3_at 304.8 P 0.000857
AFFX-LysX-5_at 755.8 P 0.000044
AFFX-LysX-M_at 1077.8 P 0.000052
AFFX-LysX-3_at 2117.8 P 0.000044
AFFX-PheX-5_at 4195.1 P 0.000044
AFFX-PheX-M_at 5106.3 P 0.000044
AFFX-PheX-3_at 5871.3 P 0.000044
AFFX-ThrX-5_at 591.1 P 0.00011
AFFX-ThrX-M_at 730.7 P 0.000044

Total number of rows: 15923

Table truncated, full table size 432 Kbytes.

Supplementary data files not provided

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