 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jun 18, 2008 |
| Title |
umbilical_cord_blood_CD38+ |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
201337 |
| Tag Length |
17 |
| |
|
| Source name |
Human umbilical cord blood stem/progenitor cells
|
| Organism |
Homo sapiens |
| Characteristics |
Tissue: umbilical cord blood
Gender: Male/Female
Estimated 15% colony forming cells and 4% longterm culture-initiating cells
Cell purification method:Immuno-magnetic and Fluorescent Activated Cell Sorting (FACS)
Defining Markers: lin-CD34+CD38+CD45RA-CD36-CD71-CD7- (lin = CD2, CD3, CD14, CD16, CD19, CD20, CD24, CD56, CD66b and GlyA)
|
| Biomaterial provider |
Dr. Connie Eaves (ceaves@bccrc.ca), BC Cancer Research Centre
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PicoPureTM (Arcturus, Mountain View, CA)
|
| |
|
| Description |
Assays to confirm viability: Colony Forming Cell Assay (CFCs) / Longterm Culture-Initiating Cells (LTC-ICs)
PCR Amplification before SAGE
|
| |
|
| Submission date |
May 07, 2008 |
| Last update date |
Nov 19, 2008 |
| Contact name |
BCGSC BC Cancer Agency |
| E-mail(s) |
support@mouseatlas.org
|
| Organization name |
Canada's Michael Smith Genome Sciences Centre
|
| Department |
Gene Expression
|
| Lab |
Marco Marra
|
| Street address |
675 West 10th Avenue
|
| City |
Vancouver |
| State/province |
BC |
| ZIP/Postal code |
V5Z 1L3 |
| Country |
Canada |
| |
|
| Platform ID |
GPL1485 |
| Series (1) |
| GSE11795 |
Molecular Profiling of Primitive Hematopoietic Cells Generated In Vitro from Human Embryonic Stem Cells and In Vivo during Embryogenesis |
|
| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAAAAAAAAA |
16 |
79.47 |
| AAAAAAAAAAAAAAAAC |
1 |
4.97 |
| AAAAAAAAAAAAAAAAT |
2 |
9.93 |
| AAAAAAAAAAAAAATCA |
1 |
4.97 |
| AAAAAAAAAAAAACCCT |
1 |
4.97 |
| AAAAAAAAAAAACAAAA |
1 |
4.97 |
| AAAAAAAAAAAGGTATA |
1 |
4.97 |
| AAAAAAAAAACGAAAAA |
1 |
4.97 |
| AAAAAAAAAGAAAAAAA |
1 |
4.97 |
| AAAAAAAAAGGTAGTGA |
1 |
4.97 |
| AAAAAAAAATCTTGCAC |
1 |
4.97 |
| AAAAAAAAATTCAGAAG |
1 |
4.97 |
| AAAAAAAACAGATGGTC |
1 |
4.97 |
| AAAAAAAAGAAAAAAAA |
1 |
4.97 |
| AAAAAAAAGAAGTTTTG |
1 |
4.97 |
| AAAAAAAATCAAATTTT |
1 |
4.97 |
| AAAAAAAATCCACAAGG |
1 |
4.97 |
| AAAAAAAATCTACTCGG |
1 |
4.97 |
| AAAAAAAATGAAGGGGG |
1 |
4.97 |
| AAAAAAAATGAAGTAGG |
3 |
14.90 |
Total number of rows: 59989
Table truncated, full table size 1474 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
