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GEO accession:
Sample GSM29626
Query DataSets for GSM29626
Status
Public on Sep 30, 2004
Title
Rat striatum SAGE of methamphetamine treatment
Sample type
SAGE
Anchor
NlaIII
Tag Count
23585
Tag Length
10
Source name
rat striatum (Sprague-Dawley)
Organism
Rattus norvegicus
Extracted molecule
total RNA
Description
SAGE profile from rat striatum treated with 40mg/kg methamphetamine (METH)
Keywords = rat
Keywords = striatum
Keywords = methamphetamine
Keywords = SAGE
Submission date
Aug 26, 2004
Last update date
Nov 19, 2008
Contact name
Ning-sheng Cai
E-mail(s)
ncai@intra.nida.nih.gov
Phone
410-550-2732
Fax
410-550-2745
Organization name
National Institute on Drug Abuse
Department
Molecular Neuropsychiatry Branch
Street address
5500 Nathan Shock Drive
City
Baltimore
State/province
MD
ZIP/Postal code
21224
Country
USA
Platform ID
GPL23
Series (1)
GSE1711
Striatum from rats treated with methamphetamine
Data table header descriptions
TAG
Tag Sequence;
COUNT
Tag Number
TPM
tags per million
Data table
TAG
COUNT
TPM
ATAACACATA
1015
43035.83
ATACTGACAC
497
21072.72
GTGGCTCACA
335
14203.94
CAAACATCCA
216
9158.36
GCTTCATCCA
169
7165.57
TAGGTACAGG
141
5978.38
AATCAACCCG
140
5935.98
GATGCCCCCC
117
4960.78
GTAAGCATAA
97
4112.78
TGGGTTGTCT
96
4070.38
CACATACAAA
85
3603.99
CACCCATACC
85
3603.99
AATCGGAGGC
83
3519.19
CTAGTCTTTG
79
3349.59
AGCCGTCCCT
78
3307.19
GTGACAACTG
73
3095.19
TCCAATAAAG
73
3095.19
TTGTTAGTGC
67
2840.79
TTGGTGAAGG
65
2755.99
GTAAGCAAAA
63
2671.19
Total number of rows:
10011
Table truncated, full table size
187 Kbytes
.
Supplementary data files not provided
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