NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM303488 Query DataSets for GSM303488
Status Public on Jul 30, 2008
Title miR-223 null murine neutrophils - Rep 3
Sample type RNA
 
Source name Neutrophils
Organism Mus musculus
Characteristics Expression profile of mRNAs from neutrophils directly isolated from miR-223 null mouse bone marrow - Rep 3
Treatment protocol Neutrophils were isolated using Gr-1 antibody and MACS.
Growth protocol Samples were directly isolated from a mouse.
Extracted molecule total RNA
Extraction protocol Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
Label Biotin
Label protocol Affy Standard Labeling Protocol
 
Hybridization protocol Affy Standard Hyb Protocol
Scan protocol Affy Scan Protocol
Description mRNA expression profile comparison between wild-type murine neutrophils versus miR-223 null murine neutrophils. This data shows expression profile of mRNAs from neutrophils directly isolated from miR-223 null mouse bone marrow.
Data processing GCOS and RMAExpress Software
 
Submission date Jul 03, 2008
Last update date Aug 28, 2018
Contact name Whitehead Institute
E-mail(s) sgupta@wi.mit.edu
Phone 617-324-0339
Organization name Whitehead Institute
Department Genome Technology Core
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02141
Country USA
 
Platform ID GPL1261
Series (2)
GSE12001 Wild-type neutrophils and miR-223 null neutrophils
GSE12075 The impact of microRNAs on protein output
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal Intensity (Log2)

Data table
ID_REF VALUE
1415670_AT 8.025780
1415671_AT 11.607182
1415672_AT 11.141464
1415673_AT 6.200683
1415674_A_AT 9.954913
1415675_AT 8.980382
1415676_A_AT 10.450862
1415677_AT 10.128512
1415678_AT 11.189556
1415679_AT 12.172206
1415680_AT 7.751214
1415681_AT 9.989887
1415682_AT 7.728825
1415683_AT 10.102139
1415684_AT 9.045194
1415685_AT 7.471620
1415686_AT 9.844687
1415687_A_AT 13.296736
1415688_AT 10.165257
1415689_S_AT 7.849756

Total number of rows: 45101

Table truncated, full table size 902 Kbytes.




Supplementary file Size Download File type/resource
GSM303488.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap