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GEO accession:
Sample GSM304909
Query DataSets for GSM304909
Status
Public on Aug 20, 2008
Title
NOD Aire WT MEC rep2
Sample type
RNA
Source name
MHC class II high thymic medullary epithelial cells, NODaireWT
Organism
Mus musculus
Characteristics
Aire WT
Extracted molecule
total RNA
Extraction protocol
RNA by Trizol method
Label
biotin
Label protocol
biotin
Hybridization protocol
BioArray High Yield RNA transcript labeling T7 kit (Enzo Life Sciences)
Scan protocol
Standard Affymetrix protocol
Description
Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: NOD
Data processing
RMA
Submission date
Jul 10, 2008
Last update date
Aug 19, 2008
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (1)
GSE12073
Expression data from transgenic Aire expressing pancreatic islets
Data table header descriptions
ID_REF
VALUE
RMA expression value
Data table
ID_REF
VALUE
1415670_at
384.9563251
1415671_at
1169.690077
1415672_at
3380.111565
1415673_at
325.0978085
1415674_a_at
679.7866132
1415675_at
402.4271003
1415676_a_at
3101.496232
1415677_at
384.8679923
1415678_at
1343.345122
1415679_at
4102.859175
1415680_at
363.7128804
1415681_at
327.613842
1415682_at
249.5359827
1415683_at
3619.928064
1415684_at
295.7168871
1415685_at
140.1068508
1415686_at
2857.879899
1415687_a_at
6171.708431
1415688_at
2239.037093
1415689_s_at
601.3923558
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM304909.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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