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GEO accession:
Sample GSM304911
Query DataSets for GSM304911
Status
Public on Aug 20, 2008
Title
NOD Aire KO MEC rep1
Sample type
RNA
Source name
MHC class II high thymic medullary epithelial cells, NODaireKO
Organism
Mus musculus
Characteristics
Aire KO
Extracted molecule
total RNA
Extraction protocol
RNA by Trizol method
Label
biotin
Label protocol
biotin
Hybridization protocol
BioArray High Yield RNA transcript labeling T7 kit (Enzo Life Sciences)
Scan protocol
Standard Affymetrix protocol
Description
Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: NOD
Data processing
RMA
Submission date
Jul 10, 2008
Last update date
Aug 19, 2008
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (1)
GSE12073
Expression data from transgenic Aire expressing pancreatic islets
Data table header descriptions
ID_REF
VALUE
RMA expression value
Data table
ID_REF
VALUE
1415670_at
271.6672207
1415671_at
803.1340937
1415672_at
3814.698594
1415673_at
212.7706256
1415674_a_at
757.2515077
1415675_at
328.0771665
1415676_a_at
1291.898196
1415677_at
307.9936975
1415678_at
1587.211493
1415679_at
3994.362952
1415680_at
261.872649
1415681_at
215.8078005
1415682_at
224.3815231
1415683_at
3589.940077
1415684_at
284.0130206
1415685_at
368.1400844
1415686_at
2355.763218
1415687_a_at
5535.645974
1415688_at
2131.190077
1415689_s_at
546.5317035
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM304911.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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