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Sample GSM30972 Query DataSets for GSM30972
Status Public on Sep 30, 2004
Title F1#67 U34B
Sample type RNA
 
Source name Heart, Left Ventricle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description RNA was extracted from the left ventricle of the heart, taken from a single 15 week old inbred rat that was maintained under specific pathogen free conditions. Target cRNA was prepared using the Enzo Bioarray High Yield RNA Transcript Labeling Kit (Enzo Diagnostics, Farmingdale, NY), purified on a column (Rneasy mini kit, Qiagen), and hybridized to commercially available Affymetrix rat GeneChips arrays according to protocols recommended by the manufacturers. Data was analyzed using the GeneChip Expression Analysis Software (Affymetrix).
Keywords = quantitative real-time RT-PCR
Keywords = insulin receptor substrate 2 (Irs2)
Keywords = phosphatidylinositol 3-kinase
Keywords = regulatory subunit 1
Keywords = (Pik3r1)
Keywords = endurance running
Keywords = treadmill running
 
Submission date Sep 24, 2004
Last update date May 27, 2005
Contact name Justin A. Ways
E-mail(s) jways@mco.edu
Phone 419-383-4150
Organization name Medical College of Ohio
Department Physiology and Cardiovascular Genomics
Street address 3035 Arlington Ave.
City Toledo
State/province OH
ZIP/Postal code 43614
Country USA
 
Platform ID GPL86
Series (1)
GSE1795 Expression Profiling of DA, COP, and F1(COPxDA) rat left ventricles

Data table header descriptions
ID_REF
VALUE normalized signal representing quantity of transcript
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE measure of the significance of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 11.4 A 0.834139
AFFX-MurIL10_at 5.1 A 0.883887
AFFX-MurIL4_at 2.8 A 0.868639
AFFX-MurFAS_at 7.3 A 0.749204
AFFX-BioB-5_at 237.4 P 0.021902
AFFX-BioB-M_at 444.7 P 0.000446
AFFX-BioB-3_at 146.7 P 0.028457
AFFX-BioC-5_at 745.3 P 0.000127
AFFX-BioC-3_at 464.9 P 0.000225
AFFX-BioDn-5_at 512.9 P 0.001102
AFFX-BioDn-3_at 3593.1 P 0.000169
AFFX-CreX-5_at 8393.6 P 0.000044
AFFX-CreX-3_at 9742.1 P 0.000044
AFFX-BioB-5_st 68 A 0.227636
AFFX-BioB-M_st 61.5 A 0.58862
AFFX-BioB-3_st 15.8 A 0.876428
AFFX-BioC-5_st 8.2 A 0.960339
AFFX-BioC-3_st 7.4 A 0.749204
AFFX-BioDn-5_st 19.3 A 0.340661
AFFX-BioDn-3_st 112.5 A 0.089478

Total number of rows: 8791

Table truncated, full table size 267 Kbytes.




Supplementary data files not provided

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