|
Status |
Public on Jan 09, 2009 |
Title |
CD133-H3K4me1 |
Sample type |
SRA |
|
|
Source name |
CD133+ cells
|
Organism |
Homo sapiens |
Characteristics |
CD133 H3K4me1
|
Treatment protocol |
Treatment protocol as described in Cui et al., 2008
|
Growth protocol |
Growth protocol as described in Cui et al., 2008
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Extract protocol as described in Cui et al., 2008
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina Genome Analyzer |
|
|
Description |
Chromatin IP against H3K4me1 run132_lane1 run145_lane3
|
Data processing |
Sequence reads were obtained and mapped to the human (March, 2006) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Cui et al., 2008
|
|
|
Submission date |
Sep 03, 2008 |
Last update date |
May 15, 2019 |
Contact name |
Chongzhi Zang |
Organization name |
University of Virginia
|
Street address |
P. O. Box 800717
|
City |
Charlottesville |
State/province |
VA |
ZIP/Postal code |
22908 |
Country |
USA |
|
|
Platform ID |
GPL9052 |
Series (1) |
GSE12646 |
Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation |
|
Relations |
SRA |
SRX005148 |
BioSample |
SAMN02195225 |
Named Annotation |
GSM317586_CD133-H3K4me1.bed.gz |