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Sample GSM317590 Query DataSets for GSM317590
Status Public on Jan 09, 2009
Title CD133-H4K20me1
Sample type SRA
Source name CD133+ cells
Organism Homo sapiens
Characteristics CD133 H4K20me1
Treatment protocol Treatment protocol as described in Cui et al., 2008
Growth protocol Growth protocol as described in Cui et al., 2008
Extracted molecule genomic DNA
Extraction protocol Extract protocol as described in Cui et al., 2008
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Description Chromatin IP against H4K20me1
Data processing Sequence reads were obtained and mapped to the human (March, 2006) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Cui et al., 2008
Submission date Sep 03, 2008
Last update date May 15, 2019
Contact name Chongzhi Zang
Organization name University of Virginia
Street address P. O. Box 800717
City Charlottesville
State/province VA
ZIP/Postal code 22908
Country USA
Platform ID GPL9052
Series (1)
GSE12646 Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation
SRA SRX005152
BioSample SAMN02195734
Named Annotation GSM317590_CD133-H4K20me1.bed.gz
Named Annotation GSM317590_CD133-H4K20me1_islands.bed.gz

Supplementary file Size Download File type/resource
GSM317590_CD133-H4K20me1-summary-vstep.txt.gz 12.4 Mb (ftp)(http) TXT
GSM317590_CD133-H4K20me1.bed.gz 123.8 Mb (ftp)(http) BED
GSM317590_CD133-H4K20me1_islands.bed.gz 360.4 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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