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Sample GSM32269 Query DataSets for GSM32269
Status Public on Oct 23, 2004
Title CGH3_3 XX
Sample type genomic
 
Channel 1
Source name 2ng of Phi-29amplified commercial female DNA (Promega)
Organism Homo sapiens
Extracted molecule genomic DNA
 
Channel 2
Source name commercial male DNA (Promega)
Organism Homo sapiens
Extracted molecule genomic DNA
 
 
Description 2ng commercial female DNA (XX) were amplified with of Phi-29 enzyme (GenomiPhi kit-Amersham) in order to simulate the amounts of a microdissected sample. Details of the experiment are available within the Nucleic Acid Research, 2004 manuscript "Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH", by Cardoso J. et al.
 
Submission date Oct 14, 2004
Last update date May 27, 2005
Contact name Joana Cardoso
E-mail(s) joanacardoso@fm.ul.pt
Phone 351-21-7999519
Organization name Faculty of Medicine
Lab Biology of Chromatin Unit
Street address Av. Prof Egaz Moniz
City Lisbon
ZIP/Postal code 1700
Country Portugal
 
Platform ID GPL1506
Series (1)
GSE1841 BAC CGH array profiling using Phi29-amplified microdissected samples

Data table header descriptions
ID_REF
VALUE Log2Lowess Norm ratios, array CGH3_3, sample Phi29-amplified female DNA (XX) vs. non-amplified male (XY)

Data table
ID_REF VALUE
10 -0.964874258
11 0.012693945
20 0.015854498
21 -0.746523823
40 -0.001931834
50 -0.371074189
60 -0.254916035
61 -0.45896565
62 -0.548279592
70 -0.225578716
71 -0.124981448
72 -0.071896842
80 -0.025946969
90 0.325641397
91 0.070126686
92 0.142726798
100 -0.022388198
101 0.029960431
102 -0.019212024
110 0.404466215

Total number of rows: 3615

Table truncated, full table size 63 Kbytes.




Supplementary data files not provided
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