NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM32271 Query DataSets for GSM32271
Status Public on Oct 23, 2004
Title CGH3_23, D5_1, XY
Sample type genomic
 
Channel 1
Source name Phi-29amplified microdissected tumor colon mucosa DNA (D5_1)
Organism Homo sapiens
Extracted molecule genomic DNA
 
Channel 2
Source name commercial male DNA (Promega)
Organism Homo sapiens
Extracted molecule genomic DNA
 
 
Description Phi-29amplified microdissected dysplatic colon mucosa DNA sample(D5_1, XY) from a male individual affected by Familial Adenomatous Polyposis. Details of the experiment are available within the Nucleic Acid Research, 2004 manuscript "Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH", by Cardoso J. et al.
 
Submission date Oct 14, 2004
Last update date May 27, 2005
Contact name Joana Cardoso
E-mail(s) joanacardoso@fm.ul.pt
Phone 351-21-7999519
Organization name Faculty of Medicine
Lab Biology of Chromatin Unit
Street address Av. Prof Egaz Moniz
City Lisbon
ZIP/Postal code 1700
Country Portugal
 
Platform ID GPL1506
Series (1)
GSE1841 BAC CGH array profiling using Phi29-amplified microdissected samples

Data table header descriptions
ID_REF
VALUE Log2Lowess Norm ratios, array CGH3_1, sample Phi29-amplified microdissected normal colon mucosa D5_1 DNA (XY) vs. non-amplified male (XY)

Data table
ID_REF VALUE
10 -0.188541091
11 -0.24559407
20 0.097928882
21 -0.305379295
40 -0.416872578
50 -0.634541455
60 -0.365368047
61 -0.450337041
62 -0.458573962
70 -0.239627086
71 -0.195309703
72 -0.201474189
80 0.160855469
90 0.058615058
91 0.070142322
92 0.136366123
100 0.116339696
101 0.337612357
102 0.24018931
110 0.457630068

Total number of rows: 3615

Table truncated, full table size 63 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap