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Status
Public on Oct 23, 2004
Title
CGH3_1, D5_14, XY
Sample type
genomic
Channel 1 Source name
Phi-29amplified microdissected normal colon mucosa DNA (D5_14)
Organism
Homo sapiens Extracted molecule
genomic DNA
Channel 2 Source name
commercial male DNA (Promega)
Organism
Homo sapiens Extracted molecule
genomic DNA
Description
Phi-29amplified microdissected normal colon mucosa DNA sample(D5_14, XY) from a male individual affected by Familial Adenomatous Polyposis. Details of the experiment are available within the Nucleic Acid Research, 2004 manuscript "Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH", by Cardoso J. et al.
Submission date
Oct 14, 2004
Last update date
May 27, 2005
Contact name
Joana Cardoso
E-mail(s)
joanacardoso@fm.ul.pt Phone
351-21-7999519
Organization name
Faculty of Medicine
Lab
Biology of Chromatin Unit
Street address
Av. Prof Egaz Moniz
City
Lisbon
ZIP/Postal code
1700
Country
Portugal
Platform ID
GPL1506 Series (1)
GSE1841 BAC CGH array profiling using Phi29-amplified microdissected samples
Data table header descriptions ID_REF
VALUE Log2Lowess Norm ratios, array CGH3_40, sample Phi29-amplified microdissected normal colon mucosa D5_14 DNA (XY) vs. non-amplified male (XY)
Data table ID_REF VALUE 10
-0.23790101
11
0.047065342
20
-0.026857816
21
-0.576889061
40
-0.84692439
50
-0.353924776
60
-0.458029182
61
-0.514673373
62
-0.549154679
70
-0.216906456
71
-0.190197879
72
-0.223496896
80
-0.232119827
90
-0.355369502
91
-0.401561756
92
-0.299041862
100
-0.019094197
101
0.132118439
102
-0.003308135
110
0.327460023
3615 63 Kbytes .Supplementary data files not provided
