|
| Status |
Public on Oct 02, 2008 |
| Title |
TEL-AML1-SNP-#3 |
| Sample type |
RNA |
| |
|
| Source name |
Diagnostic_acute_leukemia
|
| Organism |
Homo sapiens |
| Characteristics |
B-progenitor ALL with ETV6-RUNX1 fusion
|
| Growth protocol |
Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
Biotin
|
| Label protocol |
As per manufacturer (Affymetrix)
|
| |
|
| Hybridization protocol |
As per manufacturer (Affymetrix)
|
| Scan protocol |
As per manufacturer (Affymetrix)
|
| Description |
TEL-AML1-SNP-#3
|
| Data processing |
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
|
| |
|
| Submission date |
Sep 30, 2008 |
| Last update date |
Oct 01, 2008 |
| Contact name |
Guangchun Song |
| Phone |
901-595-5722
|
| Organization name |
St Jude Children's Research Hospital
|
| Department |
Pathology
|
| Lab |
Klco
|
| Street address |
262 Danny Thomas Place
|
| City |
Memphis |
| State/province |
TN |
| ZIP/Postal code |
38105 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE12995 |
Expression data for diagnosis acute lymphoblastic leukemia samples |
|
