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GEO accession:
Sample GSM3273
Query DataSets for GSM3273
Status
Public on Apr 19, 2003
Title
100W_2_Nov02
Sample type
RNA
Source name
Rhodobacter sphaeroides 2.4.1
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
Illumination with tungsten bulbs at 100W/m2.
Sparged with 95%N/5%CO2.
Harvested at 0.4 OD600.
Boiling lysis/hot phenol RNA extraction.
Submission date
Dec 21, 2002
Last update date
May 27, 2005
Contact name
Samuel Kaplan
E-mail(s)
Samuel.Kaplan@uth.tmc.edu
Phone
713-500-5505
Fax
713-500-5499
URL
http://www.rhodobacter.org
Organization name
University of Texas Health Science Center at Houston
Department
Microbiology and Molecular Genetics
Street address
6431 Fannin, JFB 1.765
City
Houston
State/province
TX
ZIP/Postal code
77030
Country
USA
Platform ID
GPL162
Series (1)
GSE139
Effect of varying illumination
Data table header descriptions
ID_REF
Stat Pairs
pairs of PM-MM on chip
Stat Pairs Used
pairs of PM-MM used
VALUE
relative signal of expression
ABS_CALL
present if p<0.04, absent if p>0.06, marginal otherwise
DETECTION P-VALUE
Stat signif of Abs call (detection)
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
DETECTION P-VALUE
1
14
14
22.6
A
0.388782
2
14
14
55.3
A
0.275462
3
20
20
3.8
A
0.953518
4
20
20
22.5
A
0.275146
5
20
20
9.2
A
0.327079
6
20
20
2.3
A
0.989683
7
20
20
3.8
A
0.794268
8
20
20
21.4
A
0.544587
9
20
20
5
A
0.804734
10
20
20
5
A
0.712257
11
20
20
12.2
A
0.425962
12
20
20
1.5
A
0.559354
13
20
20
1.7
A
0.5
14
20
20
0.8
A
0.987453
15
20
20
1.2
A
0.772364
16
20
20
0.2
A
0.814869
17
20
20
11.5
A
0.287743
18
20
20
2.2
A
0.963431
19
20
20
2.3
A
0.455413
20
20
20
0.3
A
0.981719
Total number of rows:
5355
Table truncated, full table size
143 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3273.CEL.gz
1.2 Mb
(ftp)
(http)
CEL
GSM3273.CHP.gz
1.9 Mb
(ftp)
(http)
CHP
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