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Sample GSM3274 Query DataSets for GSM3274
Status Public on Apr 19, 2003
Title 100W_3_Nov02
Sample type RNA
 
Source name Rhodobacter sphaeroides 2.4.1
Organism Cereibacter sphaeroides
Extracted molecule total RNA
 
Description Illumination with tungsten bulbs at 100 W/m2.
Sparged with 95%N/5%CO2.
Harvested at 0.4 OD600.
Boiling lysis/hot phenol RNA extraction.
 
Submission date Dec 21, 2002
Last update date May 27, 2005
Contact name Samuel Kaplan
E-mail(s) Samuel.Kaplan@uth.tmc.edu
Phone 713-500-5505
Fax 713-500-5499
URL http://www.rhodobacter.org
Organization name University of Texas Health Science Center at Houston
Department Microbiology and Molecular Genetics
Street address 6431 Fannin, JFB 1.765
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL162
Series (1)
GSE139 Effect of varying illumination

Data table header descriptions
ID_REF
Stat Pairs pairs of PM-MM on chip
Stat Pairs Used pairs of PM-MM used
VALUE relative signal of expression
ABS_CALL present if p<0.04, absent if p>0.06, marginal otherwise
DETECTION P-VALUE stat signif of Abs call (detection)

Data table
ID_REF Stat Pairs Stat Pairs Used VALUE ABS_CALL DETECTION P-VALUE
1 14 14 8.9 A 0.681117
2 14 14 14.9 A 0.437646
3 20 20 4.6 A 0.971543
4 20 20 29.4 A 0.205732
5 20 20 22.2 A 0.440646
6 20 20 4 A 0.852061
7 20 20 16.1 A 0.48511
8 20 20 9.8 A 0.58862
9 20 20 23.9 A 0.58862
10 20 20 4.7 A 0.834139
11 20 20 2 A 0.262827
12 20 20 2.8 A 0.749204
13 20 20 1.5 A 0.544587
14 20 20 0.8 A 0.971543
15 20 20 0.6 A 0.686277
16 20 20 0.3 A 0.250796
17 20 20 16.4 A 0.239063
18 20 20 6.7 A 0.699394
19 20 20 3.8 A 0.737173
20 20 20 0.7 A 0.994435

Total number of rows: 5355

Table truncated, full table size 143 Kbytes.




Supplementary file Size Download File type/resource
GSM3274.CEL.gz 1.1 Mb (ftp)(http) CEL
GSM3274.CHP.gz 1.9 Mb (ftp)(http) CHP

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