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Sample GSM327664 Query DataSets for GSM327664
Status Public on Nov 01, 2008
Title hES_H3K36me3_ChIPSeq
Sample type SRA
Source name Chromatin IP against H3K36me3
Organism Homo sapiens
Characteristics Embyonic stem cells
line: H9 (passage 45)
Growth protocol Embryonic stem cells were cultured as described in (Mikkelsen et al. 2007, PMID 17603471) and (Thomson et al. 1998, PMID 9804556 )
Extracted molecule genomic DNA
Extraction protocol All ChIP experiments were performed as described in (Mikkelsen et al. 2007, PMID 17603471), except for Suz12 and Ezh2, for which an additional nucleus isolation step was included, as described in (Weinmann et al. 2001, PMID 11564866).
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Description Chromatin IP against H3K36me3
Data processing Primary sequence data were filtered and aligned as described in (Mikkelsen et al. 2007, PMID 17603471).
Submission date Oct 07, 2008
Last update date May 15, 2019
Contact name Tarjei S Mikkelsen
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
Platform ID GPL9052
Series (1)
GSE13084 Mapping polycomb complexes in human and mouse embryonic stem cells
SRA SRX003844
BioSample SAMN02195725

Supplementary file Size Download File type/resource
GSM327664_hES.H3K36me3.aligned.txt.gz 239.9 Mb (ftp)(http) TXT
GSM327664_hES.H3K36me3.densities.txt.gz 324.6 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available on Series record
Processed data provided as supplementary file
Raw data are available in SRA

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