 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jul 26, 2009 |
| Title |
H2A.Z (high salt) ChIP |
| Sample type |
SRA |
| |
|
| Source name |
H2A.Z-highsalt
|
| Organism |
Homo sapiens |
| Characteristics |
HeLa
|
| Treatment protocol |
Treatment protocol as described in Jin et al., 2008
|
| Growth protocol |
Growth protocol as described in Jin et al., 2008
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Extract protocol as described in Jin et al., 2008
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
Illumina Genome Analyzer |
| |
|
| Description |
Chromatin IP
|
| Data processing |
Sequence reads were obtained and mapped to the human (March, 2006) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Jin et al., 2008
|
| |
|
| Submission date |
Oct 22, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Chongzhi Zang |
| Organization name |
University of Virginia
|
| Street address |
P. O. Box 800717
|
| City |
Charlottesville |
| State/province |
VA |
| ZIP/Postal code |
22908 |
| Country |
USA |
| |
|
| Platform ID |
GPL9052 |
| Series (1) |
| GSE13308 |
Chromatin architecture organized by histone variants H3.3 and H2A.Z in the human genome |
|
| Relations |
| SRA |
SRX006759 |
| BioSample |
SAMN02195643 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSM335960.bed.gz |
119.4 Mb |
(ftp)(http) |
BED |
| GSM335960.txt.gz |
16.7 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Processed data provided as supplementary file |
| Raw data are available in SRA |
|
|
|
|
 |
