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| Status |
Public on Nov 04, 2008 |
| Title |
whole_fly_odt_4pmol |
| Sample type |
SRA |
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| Source name |
whole fly - ss-cDNA - oligo-dt-primed - 4pmol
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| Organism |
Drosophila melanogaster |
| Characteristics |
Whole mixed sex adult flies, pooled
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| Growth protocol |
M3+BPYE + 5% FCS,CCM3
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| Extracted molecule |
total RNA |
| Extraction protocol |
TRIzol Dnase Rneasy
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina Genome Analyzer |
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| Description |
Single Stranded cDNA, Oligo-DT Primed, run using a 4 p-mol concentration
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| Data processing |
Reads were aligned to the genome and also to the predicted transcripts so that splice sites were included.
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| Submission date |
Nov 03, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Marijke Jeltje van Baren |
| E-mail(s) |
jeltje@wustl.edu
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| Organization name |
Washington University
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| Department |
CSE
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| Lab |
Brent
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| Street address |
One Brookings Drive
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| City |
St Louis |
| State/province |
MO |
| ZIP/Postal code |
63130 |
| Country |
USA |
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| Platform ID |
GPL9058 |
| Series (1) |
| GSE13441 |
Drosophila melanogaster short read RNA |
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| Relations |
| SRA |
SRX003196 |
| BioSample |
SAMN02195661 |
| Supplementary data files not provided |
SRA Run Selector |
| Processed data are available on Series record |
| Raw data are available in SRA |
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