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Sample GSM361453 Query DataSets for GSM361453
Status Public on Jan 04, 2010
Title Diagnostic_acute_leukemia (AE-#10)
Sample type RNA
Source name Diagnostic_acute_leukemia
Organism Homo sapiens
Characteristics Tissue: acute myeloid leukemia
Growth protocol Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis or remission
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction
Label Biotin
Label protocol As per manufacturer (Affymetrix)
Hybridization protocol As per manufacturer (Affymetrix)
Scan protocol As per manufacturer (Affymetrix)
Description none
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date Jan 16, 2009
Last update date Jan 04, 2010
Contact name Guangchun Song
Phone 901-595-5722
Organization name St Jude Children's Research Hospital
Department Pathology
Lab Klco
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
Platform ID GPL96
Series (2)
GSE14471 Affymetrix U133A array data for 111 pediatric acute myeloid leukemia (AML) samples at diagnosis
GSE15347 Analysis of pediatric acute myeloid leukemia (AML) samples at diagnosis

Data table header descriptions
VALUE MAS 5.0 signal intensity

Data table
AFFX-BioB-5_at 646
AFFX-BioB-M_at 1505.1
AFFX-BioB-3_at 882.7
AFFX-BioC-5_at 2866.2
AFFX-BioC-3_at 1550.1
AFFX-BioDn-5_at 1351.1
AFFX-BioDn-3_at 11586.4
AFFX-CreX-5_at 13276.7
AFFX-CreX-3_at 21120.6
AFFX-DapX-5_at 57.5
AFFX-DapX-M_at 49.8
AFFX-DapX-3_at 30
AFFX-LysX-5_at 120.5
AFFX-LysX-M_at 28.6
AFFX-LysX-3_at 450.2
AFFX-PheX-5_at 184.8
AFFX-PheX-M_at 20.8
AFFX-PheX-3_at 65.4
AFFX-ThrX-5_at 342.4
AFFX-ThrX-M_at 32.1

Total number of rows: 22283

Table truncated, full table size 360 Kbytes.

Supplementary file Size Download File type/resource
GSM361453.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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