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Sample GSM361454 Query DataSets for GSM361454
Status Public on Jan 04, 2010
Title Diagnostic_acute_leukemia (AE-#11)
Sample type RNA
Source name Diagnostic_acute_leukemia
Organism Homo sapiens
Characteristics Tissue: acute myeloid leukemia
Growth protocol Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis or remission
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction
Label Biotin
Label protocol As per manufacturer (Affymetrix)
Hybridization protocol As per manufacturer (Affymetrix)
Scan protocol As per manufacturer (Affymetrix)
Description none
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date Jan 16, 2009
Last update date Jan 04, 2010
Contact name Guangchun Song
Phone 901-595-5722
Organization name St Jude Children's Research Hospital
Department Pathology
Lab Klco
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
Platform ID GPL96
Series (2)
GSE14471 Affymetrix U133A array data for 111 pediatric acute myeloid leukemia (AML) samples at diagnosis
GSE15347 Analysis of pediatric acute myeloid leukemia (AML) samples at diagnosis

Data table header descriptions
VALUE MAS 5.0 signal intensity

Data table
AFFX-BioB-5_at 837.5
AFFX-BioB-M_at 2106.2
AFFX-BioB-3_at 997.3
AFFX-BioC-5_at 2900.2
AFFX-BioC-3_at 2246.2
AFFX-BioDn-5_at 2108.5
AFFX-BioDn-3_at 17190
AFFX-CreX-5_at 19732.1
AFFX-CreX-3_at 27818.2
AFFX-DapX-5_at 79.1
AFFX-DapX-M_at 17
AFFX-DapX-3_at 17.7
AFFX-LysX-5_at 55.9
AFFX-LysX-M_at 38.7
AFFX-LysX-3_at 14.2
AFFX-PheX-5_at 5.3
AFFX-PheX-M_at 29.9
AFFX-PheX-3_at 32.5
AFFX-ThrX-5_at 28.3
AFFX-ThrX-M_at 60

Total number of rows: 22283

Table truncated, full table size 360 Kbytes.

Supplementary file Size Download File type/resource
GSM361454.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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