|
| Status |
Public on Jan 04, 2010 |
| Title |
Diagnostic_acute_leukemia (AE-#20) |
| Sample type |
RNA |
| |
|
| Source name |
Diagnostic_acute_leukemia
|
| Organism |
Homo sapiens |
| Characteristics |
Tissue: acute myeloid leukemia
|
| Growth protocol |
Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis or remission
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol total RNA extraction
|
| Label |
Biotin
|
| Label protocol |
As per manufacturer (Affymetrix)
|
| |
|
| Hybridization protocol |
As per manufacturer (Affymetrix)
|
| Scan protocol |
As per manufacturer (Affymetrix)
|
| Description |
none
|
| Data processing |
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
|
| |
|
| Submission date |
Jan 16, 2009 |
| Last update date |
Jan 04, 2010 |
| Contact name |
Jeffery Klco |
| Phone |
901-595-6807
|
| Organization name |
St Jude Children's Research Hospital
|
| Department |
Pathology
|
| Lab |
Klco
|
| Street address |
262 Danny Thomas Place
|
| City |
Memphis |
| State/province |
TN |
| ZIP/Postal code |
38105 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (2) |
| GSE14471 |
Affymetrix U133A array data for 111 pediatric acute myeloid leukemia (AML) samples at diagnosis |
| GSE15347 |
Analysis of pediatric acute myeloid leukemia (AML) samples at diagnosis |
|
