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Sample GSM361463 Query DataSets for GSM361463
Status Public on Jan 04, 2010
Title Diagnostic_acute_leukemia (AE-#20)
Sample type RNA
 
Source name Diagnostic_acute_leukemia
Organism Homo sapiens
Characteristics Tissue: acute myeloid leukemia
Growth protocol Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis or remission
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction
Label Biotin
Label protocol As per manufacturer (Affymetrix)
 
Hybridization protocol As per manufacturer (Affymetrix)
Scan protocol As per manufacturer (Affymetrix)
Description none
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
 
Submission date Jan 16, 2009
Last update date Jan 04, 2010
Contact name Guangchun Song
Phone 901-595-5722
Organization name St Jude Children's Research Hospital
Department Pathology
Lab Klco
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (2)
GSE14471 Affymetrix U133A array data for 111 pediatric acute myeloid leukemia (AML) samples at diagnosis
GSE15347 Analysis of pediatric acute myeloid leukemia (AML) samples at diagnosis

Data table header descriptions
ID_REF
VALUE MAS 5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 578.1
AFFX-BioB-M_at 1206.1
AFFX-BioB-3_at 566.5
AFFX-BioC-5_at 2156.4
AFFX-BioC-3_at 1874.9
AFFX-BioDn-5_at 2872.8
AFFX-BioDn-3_at 11043.2
AFFX-CreX-5_at 20877
AFFX-CreX-3_at 29024.5
AFFX-DapX-5_at 21.9
AFFX-DapX-M_at 33.8
AFFX-DapX-3_at 13
AFFX-LysX-5_at 7.1
AFFX-LysX-M_at 14.4
AFFX-LysX-3_at 35.8
AFFX-PheX-5_at 8.7
AFFX-PheX-M_at 10.7
AFFX-PheX-3_at 78.4
AFFX-ThrX-5_at 9.9
AFFX-ThrX-M_at 11.1

Total number of rows: 22283

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM361463.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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