NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM364012 Query DataSets for GSM364012
Status Public on Mar 09, 2009
Title DBA/2J DBA2-J_104-5
Sample type RNA
 
Source name DBA2-J_104-5
Organism Mus musculus
Characteristics Hematopoietic stem/progenitor cells
Extracted molecule polyA RNA
Extraction protocol Trizol LS
Label biotin
Label protocol IVT (see manuscript)
 
Hybridization protocol The samples were applied to MouseWG-6 v1.1 Expression Beadchips and hybridized at 58C for 16-20 hours at high humidity. (See manuscript)
Scan protocol Arrays were scanned on an Illumina BeadArray Reader. (See manuscript)
Description Hematopoietic stem/progenitor cells
Data processing quantile normalization
 
Submission date Jan 23, 2009
Last update date Mar 03, 2009
Contact name Patrick Cahan
E-mail(s) patrick.cahan@jhmi.edu
Organization name Johns Hopkins University School of Medicine
Department ICE and Biomedical Engineering
Lab Cahan Lab
Street address 733 North Broadway, MRB 653
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platform ID GPL8081
Series (1)
GSE10656 The impact of copy number variation on local gene expression in mouse hematopoietic stem and progenitor cells

Data table header descriptions
ID_REF ID
VALUE quantile-normalized signal intensity
raw pre-normalization signal intensity

Data table
ID_REF VALUE raw
103290575 88.5229 82.0000
2120066 100.9062 91.7000
101740324 93.9312 86.2000
4050095 89.4979 82.8000
1230711 75.6458 71.6000
105860348 83.8250 78.3000
100450072 75.7541 71.7000
3610402 84.8312 79.1000
6110315 74.5020 70.6000
4280670 81.3625 76.3000
2370731 219.5666 184.1000
4200092 69.3000 66.0000
2060546 73.2833 69.6000
106200670 123.9770 112.4000
6110519 83.7000 78.2000
1690441 82.7041 77.4000
101450128 174.8041 149.8000
3190731 333.2291 282.8000
101230164 74.1270 70.3000
3870347 87.4979 81.2000

Total number of rows: 46629

Table truncated, full table size 1175 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap