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Status
Public on Jun 14, 2003
Title
Treg line SKA from skin graft
Sample type
SAGE
Anchor
NlaIII
Tag Count
22096
Tag Length
10
Source name
CD4+ Tr1-like T cell line H-Y specific (resting)
Organism
Mus musculus Extracted molecule
total RNA
Description
A CD4+ Treg/Tr1-like H-Y + H2Ek specific line grown from the accepted male skin grafts of female A1(M) TCR transgenic mice. mRNA was derived from CD4+ T cells (>99%) 7 days from last stimulation, and contains <0.1% mast cells. cDNA was preamplified (SMART) before SAGE analysis.
Submission date
Jan 15, 2003
Last update date
Nov 19, 2008
Contact name
Steve Cobbold
E-mail(s)
stephen.cobbold@path.ox.ac.uk Phone
+44-(0)1865-275504
Fax
+44-(0)1865-275501
URL
http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html Organization name
University of Oxford
Department
Sir William Dunn School of Pathology
Lab
Therapeutic Immunology Group
Street address
South Parks Road
City
Oxford
State/province
Oxfordshire
ZIP/Postal code
OX1 3RE
Country
United Kingdom
Platform ID
GPL11 Series (2)
GSE205 Mouse T helper cell clones
GSE1316 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals
Data table header descriptions TAG 10 base pair SAGE Tag
COUNT Absolute count of each Tag in library
TPM tags per million
Data table TAG COUNT TPM GTGGCTCACA
443
20048.88
GCGGCGGATG
425
19234.25
CCCTGAGTCC
300
13577.12
CACAAACGGT
254
11495.29
GATACTTGGA
234
10590.15
GATTGAGAAT
166
7512.67
AGGAAGGCGG
158
7150.62
TTGGTGAAGG
154
6969.59
AGAGCGAAGT
143
6471.76
ACAACTTCCT
141
6381.25
CAAGGTGACA
137
6200.22
AAAACAGTGG
121
5476.10
AGACCGGAAG
120
5430.85
AGGCAGACAG
119
5385.59
GCCTCCAAGG
111
5023.53
GCTGCCCTCC
104
4706.73
AAGATCAAGA
101
4570.96
CAGAACCCAC
101
4570.96
CCCCAGCCAG
88
3982.62
TGGAACAATG
88
3982.62
7959 149 Kbytes .Supplementary data files not provided
