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Sample GSM3683 Query DataSets for GSM3683
Status Public on Jun 14, 2003
Title CD4+CD25neg spleen
Sample type SAGE
Anchor NlaIII
Tag Count 23343
Tag Length 10
 
Source name MACS sorted CD4+CD25- spleen T cells
Organism Mus musculus
Extracted molecule total RNA
 
Description CD4+CD25negative spleen cells were purified from naive CBA/Ca mice by MACS sorting. cDNA was preamplified (SMART) before SAGE analysis.
 
Submission date Jan 15, 2003
Last update date Nov 19, 2008
Contact name Steve Cobbold
E-mail(s) stephen.cobbold@path.ox.ac.uk
Phone +44-(0)1865-275504
Fax +44-(0)1865-275501
URL http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html
Organization name University of Oxford
Department Sir William Dunn School of Pathology
Lab Therapeutic Immunology Group
Street address South Parks Road
City Oxford
State/province Oxfordshire
ZIP/Postal code OX1 3RE
Country United Kingdom
 
Platform ID GPL11
Series (2)
GSE206 CD4/CD25 subsets of mouse spleen
GSE1316 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals

Data table header descriptions
TAG 10 base pair SAGE Tag
COUNT Absolute count of each Tag in library
TPM tags per million

Data table
TAG COUNT TPM
GTGACCACGG 469 20091.68
CACAAACGGT 380 16278.97
AACGAGGAAT 376 16107.61
GCCACCGTCC 374 16021.93
GAAAATGAGA 365 15636.38
GAAGTCGGAA 242 10367.13
AGAGCGAAGT 195 8353.68
CCAGAGTCTC 160 6854.30
CTAACTAGTT 159 6811.46
CTAATAAAGC 157 6725.79
CACAACGGTA 154 6597.27
CCCTGAGTCC 133 5697.64
GGGAATAATT 131 5611.96
GATACTTGGA 128 5483.44
GTGGCTCACA 126 5397.76
GGCTTCGGTC 114 4883.69
GCCGTTCTTA 113 4840.85
AATGGATGAA 112 4798.01
AACACTTGGA 111 4755.17
CCAGAACAGA 107 4583.82

Total number of rows: 11094

Table truncated, full table size 206 Kbytes.




Supplementary data files not provided

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